2011-2013   瑞士联邦水科学与技术研究所(Eawag/ETH)，博士联合培养
2004-2013   山东大学环境科学与工程学院，学士/博士

2018-至今     华南师范大学，助理研究员/副研究员
2013-2017    阿尔伯塔大学/华盛顿大学（圣路易斯），博士后研究员

课程“Environmental Engineering Fundamentals” (CIV E 221 Lab)，2014 & 2015，阿尔伯塔大学
本科生通识课《生态文明建设与你我他》
本科生专业课《环境生物技术》、《生态环境综合实习》
研究生专业课《分子生物学及组学技术》、《现代环境生物技术》、《环境生物工程》

1. 国家自然科学基金面上项目“复合污染诱导的硝化菌群抗性基因产生和转移机制”，53万，主持，2023-2026
2. 广东省自然科学基金面上项目“复合污染胁迫下好氧硝化颗粒污泥系统抗性基因演化机制研究”，10万，主持，2023-2025
3. 省重点实验室开放基金项目“固定生物膜-活性污泥系统抗生素去除及耐药基因消长机制研究”，5万，主持，2020-2022
4. 国家自然科学基金 青年基金“养殖废水处理好氧颗粒污泥系统的构建及其抗生素去除机理研究”，25.5万，主持，2019-2021
5. 华南师范大学青年英才科研启动经费，主持，2018-2021
6. 国家自然科学基金重点项目“养殖环境抗生素和耐药基因的污染过程与效应研究”，297万，参与，2021-2025（2/10）

论文发表：
2024
1. Shi YJ^#, Ma L^#, Zhou M, He ZL, Zhao YC, Hong JY, Zou XY, Zhang L, Shu LF*, Copper stress shapes the dynamic behavior of amoebae and their associated bacteria. The ISME Journal, 2024, 18(1), wrae100. 
2. Zhang RD, Gao FZ, Shi YJ*, Zhao JL, Liu YS, He LY, Ying GG, Metagenomic investigation of antibiotic resistance genes and resistant bacteria contamination in pharmaceutical plant sites in China. Environmental Pollution, 2024, 357, 124482. 
3. Yang XQ, Shi YJ*, Ying GG, Li MY, He ZL, Shu LF*, Cooperation among nitrifying microorganisms promotes the irreversible biotransformation of sulfamonomethoxine. Science of the Total Environment, 2024, 923, 171395. 
4. 杨炯彬, 黄争, 赵建亮*, 何良英, 刘有胜, 胡立新, 石义静, 应光国, 我国典型制药厂污染场地中抗生素的污染特征及生态风险. 环境科学, 2024, 45(2):1004-1014.

2023
1. Zhang Z*, Zhong MQ, Xiang HS, Ding YG, Wang YL, Shi YJ*, Yang G*, Tang B, Tam KC., Zhou GF, Antibacterial polylactic acid fabricated via Pickering emulsion approach with polyethyleneimine and polydopamine modified cellulose nanocrystals as emulsion stabilizers, International Journal of Biological Macromolecules. 2023, 253, 127263. 
2. Li MY, Zhang RD, Lin YX, Li QW, Zhao QY, Zhao ZX, Ling ZM, Shu LF, Zhang M, Hu LX*, Shi YJ*, Ying GG, Biotransformation of sulfamonomethoxine in a granular sludge system: Pathways and mechanisms, Chemosphere. 2023, 313, 137508. 

2021
1. Shi YJ, Yang L, Liao SF, Zhang LG, Liao ZC, Lan MY, Sun F, Ying GG*, Responses of aerobic granular sludge to fluoroquinolones: Microbial community variations, and antibiotic resistance genes, Journal of Hazardous Materials. 2021, 414, 125527. 
2. 杨雷, 彭涛, 张晋娜, 石义静*, 史文俊, 应光国*, 一株高效1,4-雄烯二酮降解菌的筛选、鉴定及其降解转化特性研究. 环境科学学报. 2021, 41(3): 940-950.
3. Shi YJ, Queller DC, Tian YH, Zhang SY, Yan QY, He ZL, He ZZ, Wu CY, Wang C*, Shu LF*, The ecology and evolution of amoeba-bacterium interactions, Applied and Environmental Microbiology. 2021, 87(2): e01866-20. 
4. Shi YJ, Liu Y*, Evolution of extracellular polymeric substances (EPS) in aerobic sludge granulation: Composition, adherence and viscoelastic properties, Chemosphere. 2021, 262: 128033. 
5. Shu LF, He ZZ, Guan XT, Tian YH, Zhang SY, Wu CY, He ZL, Yan QY, Wang C*, Shi YJ*, A dormant amoeba species can selectively sense and predate on different soil bacteria, Functional Ecology. 2021, 00: 1-14. 

2020
1. Gao FZ, He LY, He LX, Zou HY, Zhang M, Wu DL, Liu YS, Shi YJ, Bai H, Ying GG, Untreated swine wastes changed antibiotic resistance and microbial community in the soils and impacted abundances of antibiotic resistance genes in the vegetables, Science of the Total Environment. 2020, 741: 140482.
2. Sun F*, Zhang HY, Qian AJ, Yu HF, Xu CH, Pan R, Shi YJ, The influence of extracellular polymeric substances on the coagulation process of cyanobacteria, Science of the Total Environment. 2020, 720 (10), 137573.
3. Wang L*, Wang JY, Yan W, He C, Shi YJ, MgFe₂O₄-biochar based lanthanum alginate beads for advanced phosphate removal, Chemical Engineering Journal. 2020, 387, 123305.

2019
1. 杨雷, 张晋娜, 史文俊, 彭涛, 熊倩, 石义静*, 应光国*, 类固醇激素在环境中的污染现状及归趋. 生态毒理学报, 2019, 14(5): 1-20.
2. 杨雷, 张晋娜, 徐敏, 彭涛, 史文俊, 石义静*, 应光国*, 中国南海流沙湾中雄激素尧糖皮质激素和孕激素的污染特征及其生态风险评价. 环境科学，2019, 40(11): 4879-4888.

2018前
1. Shi YJ, Huang CK, Mohamed Gamal El-Din, Liu Y*, Optimization of Moving Bed Biofilm Reactors for Oil Sands Process-Affected Water Treatment: the effect of HRT and ammonia concentrations, Science of the Total Environment. 2017, 598: 690-696.
2. George F. Wells*, Shi YJ, Michele Laureni, Alex F. Rosenthal, Ilona Szivák, David G. Weissbrodt, Adriano Joss, Helmut Buergmann, David R. Johnson, and Eberhard Morgenroth, Comparing the resistance, resilience, and stability of replicate moving bed biofilm and suspended growth combined Nitritation-Anammox reactors, Environmental Science & Technology. 2017, 51 (9): 5108-5117.
3. Shao YX, Shi YJ, Abdul Mohammed, Liu Y*, Wastewater ammonia removal using an integrated fixed-film activated sludge-sequencing batch biofilm reactor (IFAS-SBR): Comparison of suspended flocs and attached biofilm, International Biodeterioration & Biodegradation. 2017, 116: 38-47.
4. Huang CK, Shi YJ, Xue JK, Zhang YY, Mohamed Gamal El-Din, Liu Y*, Comparison of biomass from integrated fixed-film activated sludge (IFAS), moving bed biofilm reactor (MBBR) and membrane bioreactor (MBR) treating recalcitrant organics: importance of attached biomass, Journal of Hazardous Materials. 2017, 326: 120-129.
5. Huang CK, Shi YJ, Sheng ZY, Mohamed Gamal El-Din*, Liu Y*, Characterization of microbial communities during start-up of integrated fixed-film activated sludge (IFAS) systems for the treatment of oil sands process-affected water (OSPW), Biochemical Engineering Journal. 2017, 122: 123-132.
6. Huang CK, Shi YJ, Mohamed Gamal El-Din*, Liu Y*, Performance of flocs and biofilms in integrated fixed-film activated sludge (IFAS) systems for the treatment of oil sands process-affected water (OSPW), Chemical Engineering Journal. 2017, 314: 368-377.
7. Shi YJ, George Wells*, Eberhard Morgenroth, Microbial activity balance in size fractionated suspended growth biomass from full-scale sidestream combined nitritation-anammox reactors, Bioresource Technology. 2016, 218: 38-45.
8. Huang CK, Shi YJ, Mohamed Gamal El-Din*, Liu Y*, Optimization of ozonation combined with integrated fixed-film activated sludge (IFAS) in the treatment of oil sands process-affected water (OSPW), International Biodeterioration & Biodegradation. 2016, 112:31-41.
9. Shi YJ, Huang CK, Ketley Costa Rocha, Mohamed Gamal El-Din, Liu Y*, Treatment of oil sands process-affected water using moving bed biofilm reactors: With and without ozone pretreatment, Bioresource Technology. 2015, 192: 219-227.
10. Huang CK, Shi YJ, Mohamed Gamal El-Din, Liu Y*, Treatment of oil sands process-affected water (OSPW) using ozonation combined with integrated fixed-film activated sludge (IFAS), Water Research. 2015, 85: 167-176.
11. Song C, Sun XF, Xing SF, Xia PF, Shi YJ, Wang SG*, Characterization of the interactions between tetracycline antibiotics and microbial extracellular polymeric substances with spectroscopic approaches, Environmental Science and Pollution Research. 2014, 21: 1786-1795.
12. Md. Shahinoor Islam, Fahmida Tumpa, Xue JK, Huang CK, Kusumakar Sharma, Shi YJ, Liu Y*, Biological Fixed Film, Water Environment Research. 2014, 86 (10): 1070-1100.
13. Shi YJ, Xing SF, Wang XH, Wang SG*, Changes of the reactor performance and the properties of granular sludge under tetracycline (TC) stress, Bioresource Technology. 2013, 139: 170-175.
14. Wang XH*, Song RH, Yang HC, Shi YJ, Dang GB, Yang S, Zhao Y, Sun XF, Wang SG*, Fluoride adsorption on carboxylated aerobic granules containing Ce (III), Bioresource Technology. 2013, 127: 106-111.
15. Wang XH*, Jiang LX, Shi YJ, Gao MM, Yang S, Wang SG*, Effects of step-feed on granulation processes and nitrogen removal performances of partial nitrifying granules, Bioresource Technology. 2012, 123:375-381.
16. Wang XH*, Diao MH, Ying Yang, Shi YJ, Gao MM, Wang SG*, Enhanced aerobic nitrifying granulation by static magnetic field, Bioresource Technology. 2012, 110: 105-110.
17. Shi YJ, Wang XH, Yu HB, Xie HJ, Teng SX, Sun XF, Tian BH, Wang SG*, Aerobic granulation for nitrogen removal via nitrite in a sequencing batch reactor and the emission of nitrous oxide, Bioresource Technology. 2011, 102: 2536-2541.
18. Shi YJ, Wang XH, Qi Z, Diao MH, Gao MM, Xing SF, Wang SG*, Sorption and biodegradation of tetracycline by nitrifying granules and the toxicity of tetracycline on granules, Journal of Hazardous Materials. 2011, 191: 103-109.
19. Xie HJ#, Shi YJ#, Zhang J, Cui Y, Teng SX, Wang SG*, Zhao R, Degradation of phthalate esters (PAEs) in soil and the effects of PAEs on soil microcosm activity, Journal of Chemical Technology and Biotechnology. 2010, 85 (8): 1108-1116.
20. 张建, 石义静, 崔寅, 谢慧君, 王文兴. 土壤中邻苯二甲酸酯类物质的降解及其对土壤酶活性的影响. 环境科学，2010 (31): 3056-3061.
21. Wang SG*, Ma Y, Shi YJ, Gong WX, Defluoridation performance and mechanism of nano-scale aluminum oxide hydroxide in aqueous solution, Journal of Chemical Technology and Biotechnology. 2009, 84: 1043-1050.
22. 谢慧君, 石义静, 滕少香, 王文兴. 邻苯二甲酸酯对土壤微生物群落多样性的影响. 环境科学，2009 (30): 1286-1291.

研究方向关键词：生物脱氮功能微生物；抗生素降解转化机理；抗生素抗性基因演化；废水处理系统中的环境微生物。
欢迎具有环境科学与工程、环境生态学、分子生物学、生信分析等背景的优秀学生报考研究生。